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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921639.1_cds_XP_016470536.1_62975
CDS Infomation

[gene=LOC107792812] [db_xref=GeneID:107792812] [protein=diaminopimelate decarboxylase 1, chloroplastic-like] [protein_id=XP_016470536.1] [location=complement(join(9061..9141,9933..10022,10134..10256,10450..10635,10805..10966,11737..11886,12747..12921,14132..14607))] [gbkey=CDS]
Sequence

ATGGCGGCTACGCACCTTGTCTCTCACTCTCCATCACTTCCCAAATCTCTCAAATACCCT
TCAAACCCAACACCAAAGCTCTCATTTTTCAAACCCATTTTCCCATTAAAGCCCATTTCA
AGAAATCTATGCGTAAGAGCAGCTGTATCAACTTCTGAGCCTCAAACTCAGAAATTTCAG
CACTGTTTCATGAAATCTGGAGATGGGTTTTTGTATTGTGAAGGTGTTAAGGTTCAAGAT
GTTATGGAAACTGTAGAAAAAAGGCCTTTTTATTTGTATAGTAAGCCCCAAATTACTAGG
AATGTTGAGGCTTATAAGGCAGCTTTAGAGGGTTTGAATTCCATTATTGGTTATGCTATT
AAGGCCAATAATAATCTCAAGATTTTGGAACATCTGAGAGGGCTTGGTTGTGGGGCTGTT
TTGGTTAGTGGGAATGAGCTCAAGTTGGCTCTTCGTGCTGGATTTGATCCTACCAAGTGT
ATTTTTAATGGAAATGGGAAGCTGTTGGAGGACCTAGTGATAGCTGCCCAAGAAGGAGTG
TTTGTAAACATCGACAGCGAATTTGACTTGGATAACATTGTAGCAGCTGCAAGGATTTCT
GGGAAGAAGGTTAATGTGCTACTCAGGATTAATCCAGATGTGGATCCTCAGGTTCATCCT
TATGTTGCCACTGGAAATAAGAGCTCCAAATTTGGCATCAGAAATGAGAAGCTGCAATGG
TTCCTAGATGCTGTCAAGGCACATCCTCAGGAACTGAAACTTGTTGGAGCTCATTGTCAT
CTTGGGTCAACTATCACCAAGGTCGACATTTTTCGAGATGCAGCTGTCTTGATGGTGAAC
TACATTGACGAAATTCGATCCCAAGGATTTGAAATTGATTACCTGAACATTGGAGGTGGT
TTAGGGATTGATTACTATCATTCTGGAGCTGTCCTTCCTTCACCTAGAGATCTTATTGAT
ACGGTGCGAGAATTGGTCCTCTCACGAAACCTCAATCTCATTATTGAACCCGGAAGATCA
CTGATTGCAAACACATGCTGTTTGGTTAACAGAGTTACTGGAGTTAAAACCAATGGGACC
AAAAACTTTATTGTGATTGATGGTAGCATGGCTGAGCTTATACGTCCAAGTCTGTATGAT
GCTTATCAGCACATAGAGCTTGTTTCCCCTCCACCAGCAGAAGCTGTGATTTCTAGGTTT
GATGTTGTTGGTCCTGTATGCGAGTCTGCAGATTTCCTGGGAAAGGACAGGGAACTTCCC
GCCCCTTCTAGGGGCACTGGTCTCGTAGTTCACGATGCAGGAGCTTATTGTATGAGTATG
GCATCAACTTACAATCTCAAGATGCGACCTCCTGAGTACTGGGTGGAAGAAGATGGATCA
ATATCCAAAATCCGGCACGGGGAGACATTTGAAGACCATTTGAGATTCTTTGAGGGTCTG
TAA

Peptide Sequence

PEP ID

XP_016470536.1
PEP Infomation

PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAATHLVSHSPSLPKSLKYPSNPTPKLSFFKPIFPLKPISRNLCVRAAVSTSEPQTQKFQ
HCFMKSGDGFLYCEGVKVQDVMETVEKRPFYLYSKPQITRNVEAYKAALEGLNSIIGYAI
KANNNLKILEHLRGLGCGAVLVSGNELKLALRAGFDPTKCIFNGNGKLLEDLVIAAQEGV
FVNIDSEFDLDNIVAAARISGKKVNVLLRINPDVDPQVHPYVATGNKSSKFGIRNEKLQW
FLDAVKAHPQELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRSQGFEIDYLNIGGG
LGIDYYHSGAVLPSPRDLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNRVTGVKTNGT
KNFIVIDGSMAELIRPSLYDAYQHIELVSPPPAEAVISRFDVVGPVCESADFLGKDRELP
APSRGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSISKIRHGETFEDHLRFFEGL

Transcript Sequence

Gene sequence data has not been registered.